Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NFKB1P19838 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NFKB1P19838 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.11■□□□□ 0.01
NFKB1P19838 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.11■□□□□ 0.01
NFKB1P19838 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NFKB1P19838 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 AP000593.2-201ENST00000542775 1433 ntBASIC15.11■□□□□ 0.01
NFKB1P19838 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NFKB1P19838 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.11■□□□□ 0.01
NFKB1P19838 RN7SKP175-201ENST00000408472 289 ntBASIC15.11■□□□□ 0.01
NFKB1P19838 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.11■□□□□ 0.01
NFKB1P19838 AC016694.1-201ENST00000434179 700 ntBASIC15.11■□□□□ 0.01
NFKB1P19838 KRT17P7-201ENST00000451704 1104 ntBASIC15.11■□□□□ 0.01
NFKB1P19838 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 AP003171.2-201ENST00000528208 925 ntBASIC15.11■□□□□ 0.01
NFKB1P19838 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 AC078819.1-201ENST00000547454 765 ntBASIC15.11■□□□□ 0.01
NFKB1P19838 AC012085.1-201ENST00000548270 765 ntBASIC15.11■□□□□ 0.01
NFKB1P19838 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 OR10B1P-201ENST00000601666 907 ntBASIC15.11■□□□□ 0.01
NFKB1P19838 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.11■□□□□ 0.01
NFKB1P19838 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 AC027601.5-201ENST00000624065 2482 ntBASIC15.11■□□□□ 0.01
NFKB1P19838 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.11■□□□□ 0.01
NFKB1P19838 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.11■□□□□ 0.01
NFKB1P19838 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
NFKB1P19838 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NFKB1P19838 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.11■□□□□ 0.01
NFKB1P19838 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
NFKB1P19838 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.1■□□□□ 0.01
NFKB1P19838 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.1■□□□□ 0.01
NFKB1P19838 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.1■□□□□ 0.01
NFKB1P19838 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NFKB1P19838 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
NFKB1P19838 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NFKB1P19838 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.1■□□□□ 0.01
NFKB1P19838 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NFKB1P19838 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NFKB1P19838 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 AC007551.1-201ENST00000457394 519 ntBASIC15.1■□□□□ 0.01
NFKB1P19838 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NFKB1P19838 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 KRT90P-201ENST00000549264 1064 ntBASIC15.1■□□□□ 0.01
NFKB1P19838 AC005225.4-201ENST00000557330 545 ntBASIC15.1■□□□□ 0.01
NFKB1P19838 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 LINC02084-201ENST00000606069 1096 ntBASIC15.1■□□□□ 0.01
NFKB1P19838 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NFKB1P19838 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.1■□□□□ 0.01
NFKB1P19838 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.1■□□□□ 0.01
NFKB1P19838 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.1■□□□□ 0.01
NFKB1P19838 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 AC015688.4-201ENST00000580780 1647 ntBASIC15.1■□□□□ 0.01
NFKB1P19838 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NFKB1P19838 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NFKB1P19838 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NFKB1P19838 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NFKB1P19838 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NFKB1P19838 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NFKB1P19838 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NFKB1P19838 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NFKB1P19838 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NFKB1P19838 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.09■□□□□ 0.01
NFKB1P19838 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.09■□□□□ 0.01
NFKB1P19838 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NFKB1P19838 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms