Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NCLP19338 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.82■□□□□ 0.44
NCLP19338 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.82■□□□□ 0.44
NCLP19338 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.82■□□□□ 0.44
NCLP19338 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NCLP19338 AL590560.3-201ENST00000623350 461 ntBASIC17.82■□□□□ 0.44
NCLP19338 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NCLP19338 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.82■□□□□ 0.44
NCLP19338 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NCLP19338 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 MBLAC2-202ENST00000514906 1936 ntBASIC17.82■□□□□ 0.44
NCLP19338 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 AC012508.2-201ENST00000567613 1472 ntBASIC17.82■□□□□ 0.44
NCLP19338 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC17.82■□□□□ 0.44
NCLP19338 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCLP19338 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.82■□□□□ 0.44
NCLP19338 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC17.81■□□□□ 0.44
NCLP19338 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.81■□□□□ 0.44
NCLP19338 AC100757.3-201ENST00000622361 1406 ntBASIC17.81■□□□□ 0.44
NCLP19338 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NCLP19338 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.81■□□□□ 0.44
NCLP19338 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NCLP19338 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 MIR661-201ENST00000384842 89 ntBASIC17.81■□□□□ 0.44
NCLP19338 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.81■□□□□ 0.44
NCLP19338 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.81■□□□□ 0.44
NCLP19338 AC002472.2-201ENST00000442739 958 ntBASIC17.81■□□□□ 0.44
NCLP19338 COX20P2-201ENST00000452636 358 ntBASIC17.81■□□□□ 0.44
NCLP19338 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.81■□□□□ 0.44
NCLP19338 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.81■□□□□ 0.44
NCLP19338 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.81■□□□□ 0.44
NCLP19338 RN7SL204P-201ENST00000582831 262 ntBASIC17.81■□□□□ 0.44
NCLP19338 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.81■□□□□ 0.44
NCLP19338 AL138828.2-201ENST00000615812 383 ntBASIC17.81■□□□□ 0.44
NCLP19338 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.81■□□□□ 0.44
NCLP19338 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.81■□□□□ 0.44
NCLP19338 STRCP1-201ENST00000509801 5328 ntBASIC17.81■□□□□ 0.44
NCLP19338 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NCLP19338 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NCLP19338 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC17.81■□□□□ 0.44
NCLP19338 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.81■□□□□ 0.44
NCLP19338 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCLP19338 CICP8-201ENST00000455800 2813 ntBASIC17.8■□□□□ 0.44
NCLP19338 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NCLP19338 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NCLP19338 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NCLP19338 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCLP19338 AC236430.1-201ENST00000402231 743 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms