Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP1P11387 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.45■□□□□ 0.38
TOP1P11387 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TOP1P11387 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.45■□□□□ 0.38
TOP1P11387 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.45■□□□□ 0.38
TOP1P11387 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TOP1P11387 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.45■□□□□ 0.38
TOP1P11387 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TOP1P11387 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP1P11387 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP1P11387 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.45■□□□□ 0.38
TOP1P11387 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.45■□□□□ 0.38
TOP1P11387 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 AC104982.3-201ENST00000581995 514 ntBASIC17.45■□□□□ 0.38
TOP1P11387 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.45■□□□□ 0.38
TOP1P11387 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP1P11387 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.45■□□□□ 0.38
TOP1P11387 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TOP1P11387 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TOP1P11387 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.45■□□□□ 0.38
TOP1P11387 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP1P11387 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.44■□□□□ 0.38
TOP1P11387 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TOP1P11387 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TOP1P11387 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TOP1P11387 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TOP1P11387 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TOP1P11387 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TOP1P11387 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TOP1P11387 MIR663B-201ENST00000408361 115 ntBASIC17.44■□□□□ 0.38
TOP1P11387 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.44■□□□□ 0.38
TOP1P11387 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.44■□□□□ 0.38
TOP1P11387 FAM8A2P-201ENST00000528813 1142 ntBASIC17.44■□□□□ 0.38
TOP1P11387 AC131206.1-201ENST00000538078 1211 ntBASIC17.44■□□□□ 0.38
TOP1P11387 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.44■□□□□ 0.38
TOP1P11387 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TOP1P11387 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.44■□□□□ 0.38
TOP1P11387 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TOP1P11387 MIR4525-201ENST00000580000 75 ntBASIC17.44■□□□□ 0.38
TOP1P11387 AL136301.1-201ENST00000615830 422 ntBASIC17.44■□□□□ 0.38
TOP1P11387 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.44■□□□□ 0.38
TOP1P11387 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.44■□□□□ 0.38
TOP1P11387 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TOP1P11387 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.44■□□□□ 0.38
TOP1P11387 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TOP1P11387 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 FGD5P1-202ENST00000614866 2498 ntBASIC17.44■□□□□ 0.38
TOP1P11387 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.44■□□□□ 0.38
TOP1P11387 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TOP1P11387 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP1P11387 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
TOP1P11387 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TOP1P11387 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP1P11387 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP1P11387 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms