Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRNB1P11230 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.02■□□□□ -0
CHRNB1P11230 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.02■□□□□ -0
CHRNB1P11230 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.02■□□□□ -0
CHRNB1P11230 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CHRNB1P11230 FRMPD2B-201ENST00000431305 1347 ntBASIC15.02■□□□□ -0
CHRNB1P11230 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.02■□□□□ -0
CHRNB1P11230 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CHRNB1P11230 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.02■□□□□ -0
CHRNB1P11230 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.02■□□□□ -0
CHRNB1P11230 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.02■□□□□ -0
CHRNB1P11230 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.02■□□□□ -0
CHRNB1P11230 AC130709.1-201ENST00000484779 1212 ntBASIC15.02■□□□□ -0
CHRNB1P11230 AC006122.1-201ENST00000493323 440 ntBASIC15.02■□□□□ -0
CHRNB1P11230 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CHRNB1P11230 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.02■□□□□ -0
CHRNB1P11230 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.02■□□□□ -0
CHRNB1P11230 AC009084.3-201ENST00000623356 437 ntBASIC15.02■□□□□ -0
CHRNB1P11230 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNB1P11230 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNB1P11230 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.02□□□□□ -0.01
CHRNB1P11230 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNB1P11230 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CHRNB1P11230 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.02□□□□□ -0.01
CHRNB1P11230 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNB1P11230 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNB1P11230 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
CHRNB1P11230 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.02□□□□□ -0.01
CHRNB1P11230 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNB1P11230 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNB1P11230 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNB1P11230 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.02□□□□□ -0.01
CHRNB1P11230 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNB1P11230 TLE1P1-201ENST00000422965 589 ntBASIC15.01□□□□□ -0.01
CHRNB1P11230 AL592076.1-201ENST00000424448 303 ntBASIC15.01□□□□□ -0.01
CHRNB1P11230 AL645933.1-201ENST00000440087 609 ntBASIC15.01□□□□□ -0.01
CHRNB1P11230 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNB1P11230 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNB1P11230 CTBP2P4-201ENST00000513884 920 ntBASIC15.01□□□□□ -0.01
CHRNB1P11230 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
CHRNB1P11230 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNB1P11230 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.01□□□□□ -0.01
CHRNB1P11230 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.01□□□□□ -0.01
CHRNB1P11230 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CHRNB1P11230 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNB1P11230 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 LINC01783-202ENST00000614408 828 ntBASIC15.01□□□□□ -0.01
CHRNB1P11230 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 BX284668.2-205ENST00000619677 828 ntBASIC15.01□□□□□ -0.01
CHRNB1P11230 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNB1P11230 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNB1P11230 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNB1P11230 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms