Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PTPRFP10586 AL021707.6-201ENST00000609212 491 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 AL451007.2-201ENST00000632004 563 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 AC002472.4-201ENST00000641915 272 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
PTPRFP10586 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 AL672207.1-201ENST00000328462 1570 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPRFP10586 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 FAM90A21P-201ENST00000510875 1396 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 FAM90A15P-201ENST00000514465 1395 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 FAM90A6P-201ENST00000515148 1394 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 FAM90A16P-201ENST00000526662 1395 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 FAM90A9P-201ENST00000527940 1395 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 FAM90A5P-201ENST00000528738 1395 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 FAM90A14P-201ENST00000530386 1395 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 FAM90A13P-201ENST00000534703 1395 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPRFP10586 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPRFP10586 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPRFP10586 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPRFP10586 STK24P1-201ENST00000455035 1291 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTPRFP10586 RN7SL23P-201ENST00000484055 275 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 AC093826.1-201ENST00000508655 993 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
PTPRFP10586 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPRFP10586 SNORD3B-1-201ENST00000577988 758 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 AP005264.6-204ENST00000588436 719 ntBASIC16.55■□□□□ 0.24
PTPRFP10586 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
PTPRFP10586 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPRFP10586 AC006486.2-201ENST00000624246 2199 ntBASIC16.54■□□□□ 0.24
PTPRFP10586 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PTPRFP10586 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTPRFP10586 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPRFP10586 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPRFP10586 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPRFP10586 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPRFP10586 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.54■□□□□ 0.24
PTPRFP10586 AC005586.2-201ENST00000563946 837 ntBASIC16.54■□□□□ 0.24
PTPRFP10586 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPRFP10586 HMGB1P24-201ENST00000611897 328 ntBASIC16.54■□□□□ 0.24
PTPRFP10586 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPRFP10586 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPRFP10586 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PTPRFP10586 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PTPRFP10586 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPRFP10586 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPRFP10586 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPRFP10586 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PTPRFP10586 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPRFP10586 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPRFP10586 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPRFP10586 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPRFP10586 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPRFP10586 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPRFP10586 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PTPRFP10586 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPRFP10586 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPRFP10586 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPRFP10586 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPRFP10586 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPRFP10586 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PTPRFP10586 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPRFP10586 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPRFP10586 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPRFP10586 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PTPRFP10586 ALG1L3P-201ENST00000503331 765 ntBASIC16.53■□□□□ 0.24
PTPRFP10586 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPRFP10586 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPRFP10586 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPRFP10586 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPRFP10586 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms