Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 RN7SL470P-201ENST00000583069 259 ntBASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 AL022334.2-201ENST00000610000 484 ntBASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSB-PGBD3P0DP91 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 LYPLA2P1-203ENST00000447689 696 ntBASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 CR383656.3-201ENST00000551315 183 ntBASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 AC141586.1-203ENST00000567242 366 ntBASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 MRPL37P1-201ENST00000592451 1337 ntBASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSB-PGBD3P0DP91 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 AC090502.4-201ENST00000551714 1386 ntBASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 AC112693.3-201ENST00000624819 1983 ntBASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 KRT17P5-201ENST00000332088 839 ntBASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 AL354861.1-201ENST00000445213 355 ntBASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSB-PGBD3P0DP91 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 MROH4P-201ENST00000431302 1578 ntBASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 AC005357.2-202ENST00000590507 1060 ntBASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CSB-PGBD3P0DP91 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms