Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
FAM228BP0C875 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.83■□□□□ 0.12
FAM228BP0C875 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.83■□□□□ 0.12
FAM228BP0C875 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 MIR661-201ENST00000384842 89 ntBASIC15.83■□□□□ 0.12
FAM228BP0C875 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.83■□□□□ 0.12
FAM228BP0C875 AC022137.2-201ENST00000503482 481 ntBASIC15.83■□□□□ 0.12
FAM228BP0C875 KRT18P25-201ENST00000508931 1278 ntBASIC15.83■□□□□ 0.12
FAM228BP0C875 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.83■□□□□ 0.12
FAM228BP0C875 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.83■□□□□ 0.12
FAM228BP0C875 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.83■□□□□ 0.12
FAM228BP0C875 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
FAM228BP0C875 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
FAM228BP0C875 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
FAM228BP0C875 TCAM1P-207ENST00000485295 1537 ntBASIC15.83■□□□□ 0.12
FAM228BP0C875 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FAM228BP0C875 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.82■□□□□ 0.12
FAM228BP0C875 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FAM228BP0C875 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FAM228BP0C875 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FAM228BP0C875 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
FAM228BP0C875 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
FAM228BP0C875 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.82■□□□□ 0.12
FAM228BP0C875 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.82■□□□□ 0.12
FAM228BP0C875 AC087499.6-201ENST00000411576 835 ntBASIC15.82■□□□□ 0.12
FAM228BP0C875 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.82■□□□□ 0.12
FAM228BP0C875 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.82■□□□□ 0.12
FAM228BP0C875 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.82■□□□□ 0.12
FAM228BP0C875 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
FAM228BP0C875 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.82■□□□□ 0.12
FAM228BP0C875 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.82■□□□□ 0.12
FAM228BP0C875 AC103988.2-201ENST00000561804 725 ntBASIC15.82■□□□□ 0.12
FAM228BP0C875 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.82■□□□□ 0.12
FAM228BP0C875 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
FAM228BP0C875 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.82■□□□□ 0.12
FAM228BP0C875 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.82■□□□□ 0.12
FAM228BP0C875 AC138696.2-201ENST00000607376 223 ntBASIC15.82■□□□□ 0.12
FAM228BP0C875 WFDC1-204ENST00000613603 549 ntBASIC15.82■□□□□ 0.12
FAM228BP0C875 AP001002.3-201ENST00000623482 206 ntBASIC15.82■□□□□ 0.12
FAM228BP0C875 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 CLUHP2-201ENST00000426660 1303 ntBASIC15.82■□□□□ 0.12
FAM228BP0C875 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
FAM228BP0C875 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
FAM228BP0C875 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.82■□□□□ 0.12
FAM228BP0C875 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.82■□□□□ 0.12
FAM228BP0C875 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
FAM228BP0C875 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.82■□□□□ 0.12
FAM228BP0C875 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FAM228BP0C875 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.82■□□□□ 0.12
FAM228BP0C875 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FAM228BP0C875 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.82■□□□□ 0.12
FAM228BP0C875 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.81■□□□□ 0.12
FAM228BP0C875 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
FAM228BP0C875 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
FAM228BP0C875 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms