Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINGO3P0C6S8 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINGO3P0C6S8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 AC136604.1-201ENST00000418535 575 ntBASIC14.46□□□□□ -0.09
LINGO3P0C6S8 SERBP1P3-201ENST00000459980 809 ntBASIC14.46□□□□□ -0.09
LINGO3P0C6S8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 AL390955.2-201ENST00000603032 514 ntBASIC14.46□□□□□ -0.09
LINGO3P0C6S8 AC097359.3-201ENST00000603982 1210 ntBASIC14.46□□□□□ -0.09
LINGO3P0C6S8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 AL033527.5-202ENST00000641632 1098 ntBASIC14.46□□□□□ -0.09
LINGO3P0C6S8 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.46□□□□□ -0.09
LINGO3P0C6S8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINGO3P0C6S8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 AC027796.2-201ENST00000575326 344 ntBASIC14.45□□□□□ -0.1
LINGO3P0C6S8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 AC100757.3-201ENST00000622361 1406 ntBASIC14.45□□□□□ -0.1
LINGO3P0C6S8 AL590560.3-201ENST00000623350 461 ntBASIC14.45□□□□□ -0.1
LINGO3P0C6S8 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINGO3P0C6S8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINGO3P0C6S8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINGO3P0C6S8 AC087499.5-201ENST00000452760 1342 ntBASIC14.44□□□□□ -0.1
LINGO3P0C6S8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LINGO3P0C6S8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINGO3P0C6S8 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINGO3P0C6S8 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINGO3P0C6S8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms