Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 AC126365.1-201ENST00000578585 1514 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 WASH3P-207ENST00000560956 1394 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 INE2-201ENST00000630399 1874 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 AC092506.1-202ENST00000401022 528 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 AL133466.1-201ENST00000447582 150 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 SPTLC1P5-201ENST00000450718 252 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 UPF3AP2-201ENST00000457924 1132 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 RNA5SP423-201ENST00000517127 109 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 AC091544.8-201ENST00000619490 361 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 CU633904.3-201ENST00000624042 1029 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 AC068587.8-201ENST00000641239 219 ntBASIC14□□□□□ -0.17
RAB40ALP0C0E4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40ALP0C0E4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14□□□□□ -0.17
RAB40ALP0C0E4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AC106881.1-201ENST00000605849 3329 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AC009093.2-202ENST00000620513 2079 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AC012441.2-201ENST00000444843 739 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 RN7SL769P-201ENST00000469386 295 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 MARK2P5-201ENST00000507649 634 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 RN7SL774P-201ENST00000577467 290 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 MIR4783-201ENST00000580343 82 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AC026740.1-201ENST00000607068 791 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AP000346.4-201ENST00000614827 381 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AP001505.2-201ENST00000616815 443 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AC091812.3-201ENST00000621362 345 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms