Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RETP07949 AC074138.1-201ENST00000611182 1303 ntBASIC14.97□□□□□ -0.01
RETP07949 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RETP07949 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.97□□□□□ -0.01
RETP07949 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RETP07949 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.97□□□□□ -0.01
RETP07949 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.97□□□□□ -0.01
RETP07949 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.97□□□□□ -0.01
RETP07949 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.97□□□□□ -0.01
RETP07949 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.97□□□□□ -0.01
RETP07949 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.97□□□□□ -0.01
RETP07949 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.97□□□□□ -0.01
RETP07949 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.97□□□□□ -0.01
RETP07949 SNORD3B-2-202ENST00000571722 791 ntBASIC14.97□□□□□ -0.01
RETP07949 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.97□□□□□ -0.01
RETP07949 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.97□□□□□ -0.01
RETP07949 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.97□□□□□ -0.01
RETP07949 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.97□□□□□ -0.01
RETP07949 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
RETP07949 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.97□□□□□ -0.01
RETP07949 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
RETP07949 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.97□□□□□ -0.01
RETP07949 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RETP07949 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RETP07949 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
RETP07949 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RETP07949 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RETP07949 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.97□□□□□ -0.01
RETP07949 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RETP07949 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.97□□□□□ -0.01
RETP07949 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.96□□□□□ -0.01
RETP07949 AC023908.3-201ENST00000564211 3047 ntBASIC14.96□□□□□ -0.01
RETP07949 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RETP07949 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.96□□□□□ -0.01
RETP07949 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.96□□□□□ -0.01
RETP07949 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
RETP07949 RPS9P1-201ENST00000419943 583 ntBASIC14.96□□□□□ -0.01
RETP07949 FAM58BP-201ENST00000439056 645 ntBASIC14.96□□□□□ -0.01
RETP07949 AC079112.1-201ENST00000454972 939 ntBASIC14.96□□□□□ -0.01
RETP07949 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.96□□□□□ -0.01
RETP07949 AL157792.1-201ENST00000488281 530 ntBASIC14.96□□□□□ -0.01
RETP07949 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.96□□□□□ -0.01
RETP07949 AP002803.1-201ENST00000528836 498 ntBASIC14.96□□□□□ -0.01
RETP07949 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.96□□□□□ -0.01
RETP07949 AL160314.3-201ENST00000556041 767 ntBASIC14.96□□□□□ -0.01
RETP07949 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.96□□□□□ -0.01
RETP07949 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.96□□□□□ -0.01
RETP07949 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.96□□□□□ -0.01
RETP07949 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.96□□□□□ -0.01
RETP07949 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RETP07949 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RETP07949 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RETP07949 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RETP07949 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RETP07949 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
RETP07949 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RETP07949 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RETP07949 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.96□□□□□ -0.02
RETP07949 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
RETP07949 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RETP07949 AL390755.1-201ENST00000623716 2027 ntBASIC14.95□□□□□ -0.02
RETP07949 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.95□□□□□ -0.02
RETP07949 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms