Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHGBP05060 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CHGBP05060 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.73■□□□□ 0.43
CHGBP05060 AL157407.1-201ENST00000435784 904 ntBASIC17.73■□□□□ 0.43
CHGBP05060 VDAC1P1-201ENST00000439229 848 ntBASIC17.73■□□□□ 0.43
CHGBP05060 RPL18P13-201ENST00000478088 569 ntBASIC17.73■□□□□ 0.43
CHGBP05060 FAM8A2P-201ENST00000528813 1142 ntBASIC17.73■□□□□ 0.43
CHGBP05060 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.73■□□□□ 0.43
CHGBP05060 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.73■□□□□ 0.43
CHGBP05060 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.73■□□□□ 0.43
CHGBP05060 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.73■□□□□ 0.43
CHGBP05060 AC007663.3-201ENST00000609632 465 ntBASIC17.73■□□□□ 0.43
CHGBP05060 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.73■□□□□ 0.43
CHGBP05060 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
CHGBP05060 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CHGBP05060 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHGBP05060 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.73■□□□□ 0.43
CHGBP05060 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHGBP05060 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.72■□□□□ 0.43
CHGBP05060 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.72■□□□□ 0.43
CHGBP05060 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
CHGBP05060 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.72■□□□□ 0.43
CHGBP05060 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHGBP05060 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.72■□□□□ 0.43
CHGBP05060 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CHGBP05060 MIR1247-201ENST00000408206 136 ntBASIC17.72■□□□□ 0.43
CHGBP05060 AC006033.1-201ENST00000440505 426 ntBASIC17.72■□□□□ 0.43
CHGBP05060 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 AC022447.6-201ENST00000515522 438 ntBASIC17.72■□□□□ 0.43
CHGBP05060 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.72■□□□□ 0.43
CHGBP05060 AC100827.2-201ENST00000563214 1194 ntBASIC17.72■□□□□ 0.43
CHGBP05060 MIR3615-201ENST00000581999 87 ntBASIC17.72■□□□□ 0.43
CHGBP05060 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.72■□□□□ 0.43
CHGBP05060 MIR6720-201ENST00000611664 98 ntBASIC17.72■□□□□ 0.43
CHGBP05060 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.72■□□□□ 0.43
CHGBP05060 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHGBP05060 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 AC004899.1-201ENST00000424687 1714 ntBASIC17.72■□□□□ 0.43
CHGBP05060 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHGBP05060 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHGBP05060 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHGBP05060 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.72■□□□□ 0.43
CHGBP05060 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHGBP05060 CICP16-201ENST00000502609 2813 ntBASIC17.71■□□□□ 0.43
CHGBP05060 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CHGBP05060 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHGBP05060 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.71■□□□□ 0.43
CHGBP05060 MYADML-201ENST00000474610 2147 ntBASIC17.71■□□□□ 0.43
CHGBP05060 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.71■□□□□ 0.43
CHGBP05060 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.71■□□□□ 0.43
CHGBP05060 SCARNA21-201ENST00000517026 139 ntBASIC17.71■□□□□ 0.43
CHGBP05060 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CHGBP05060 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.71■□□□□ 0.43
CHGBP05060 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.71■□□□□ 0.43
CHGBP05060 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.71■□□□□ 0.43
CHGBP05060 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.71■□□□□ 0.43
CHGBP05060 BNIP3P13-201ENST00000599968 566 ntBASIC17.71■□□□□ 0.43
CHGBP05060 AC244093.1-201ENST00000610837 814 ntBASIC17.71■□□□□ 0.43
CHGBP05060 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CHGBP05060 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHGBP05060 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms