Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MT-ND3P03897 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND3P03897 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND3P03897 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND3P03897 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND3P03897 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND3P03897 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MT-ND3P03897 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 AL354702.1-201ENST00000442006 1960 ntBASIC15.22■□□□□ 0.03
MT-ND3P03897 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND3P03897 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND3P03897 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MT-ND3P03897 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND3P03897 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 AC011474.4-201ENST00000623523 2076 ntBASIC15.22■□□□□ 0.03
MT-ND3P03897 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
MT-ND3P03897 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND3P03897 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND3P03897 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND3P03897 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 RN7SL752P-201ENST00000463779 287 ntBASIC15.22■□□□□ 0.03
MT-ND3P03897 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND3P03897 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MT-ND3P03897 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
MT-ND3P03897 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND3P03897 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
MT-ND3P03897 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND3P03897 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 AC074044.1-201ENST00000609673 707 ntBASIC15.22■□□□□ 0.03
MT-ND3P03897 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.22■□□□□ 0.03
MT-ND3P03897 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND3P03897 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND3P03897 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MT-ND3P03897 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND3P03897 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.22■□□□□ 0.03
MT-ND3P03897 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MT-ND3P03897 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.22■□□□□ 0.03
MT-ND3P03897 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
MT-ND3P03897 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-ND3P03897 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.21■□□□□ 0.03
MT-ND3P03897 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MT-ND3P03897 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
MT-ND3P03897 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-ND3P03897 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.21■□□□□ 0.03
MT-ND3P03897 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.21■□□□□ 0.03
MT-ND3P03897 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 AC004066.1-201ENST00000502488 802 ntBASIC15.21■□□□□ 0.03
MT-ND3P03897 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-ND3P03897 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 RRP7BP-205ENST00000566851 833 ntBASIC15.21■□□□□ 0.03
MT-ND3P03897 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-ND3P03897 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.21■□□□□ 0.03
MT-ND3P03897 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 AL109936.8-201ENST00000641772 604 ntBASIC15.21■□□□□ 0.03
MT-ND3P03897 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.21■□□□□ 0.03
MT-ND3P03897 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.21■□□□□ 0.03
MT-ND3P03897 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MT-ND3P03897 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MT-ND3P03897 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms