Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
APOA1P02647 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.31□□□□□ -0.28
APOA1P02647 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.31□□□□□ -0.28
APOA1P02647 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 AL138918.1-201ENST00000568306 659 ntBASIC13.31□□□□□ -0.28
APOA1P02647 MIR3652-201ENST00000579335 131 ntBASIC13.31□□□□□ -0.28
APOA1P02647 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 LINC01711-201ENST00000598340 967 ntBASIC13.31□□□□□ -0.28
APOA1P02647 AC026979.3-201ENST00000607315 403 ntBASIC13.31□□□□□ -0.28
APOA1P02647 AL031008.1-201ENST00000619963 541 ntBASIC13.31□□□□□ -0.28
APOA1P02647 TP73-AS1-207ENST00000624167 988 ntBASIC13.31□□□□□ -0.28
APOA1P02647 AC117500.6-201ENST00000624871 588 ntBASIC13.31□□□□□ -0.28
APOA1P02647 AC010507.1-201ENST00000633895 436 ntBASIC13.31□□□□□ -0.28
APOA1P02647 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
APOA1P02647 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
APOA1P02647 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.31□□□□□ -0.28
APOA1P02647 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
APOA1P02647 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.31□□□□□ -0.28
APOA1P02647 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOA1P02647 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 AL365181.3-201ENST00000605886 3222 ntBASIC13.3□□□□□ -0.28
APOA1P02647 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.3□□□□□ -0.28
APOA1P02647 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
APOA1P02647 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 RPS2P28-201ENST00000314255 741 ntBASIC13.3□□□□□ -0.28
APOA1P02647 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 FAM220BP-201ENST00000377689 816 ntBASIC13.3□□□□□ -0.28
APOA1P02647 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.3□□□□□ -0.28
APOA1P02647 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.3□□□□□ -0.28
APOA1P02647 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.3□□□□□ -0.28
APOA1P02647 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
APOA1P02647 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
APOA1P02647 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.3□□□□□ -0.28
APOA1P02647 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOA1P02647 AC090505.1-201ENST00000430515 1834 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms