Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.27■□□□□ 0.03
MT-CO1P00395 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.27■□□□□ 0.03
MT-CO1P00395 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.27■□□□□ 0.03
MT-CO1P00395 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.27■□□□□ 0.03
MT-CO1P00395 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
MT-CO1P00395 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.27■□□□□ 0.03
MT-CO1P00395 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.27■□□□□ 0.03
MT-CO1P00395 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-CO1P00395 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
MT-CO1P00395 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MT-CO1P00395 AL023775.1-201ENST00000454907 1746 ntBASIC15.26■□□□□ 0.03
MT-CO1P00395 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
MT-CO1P00395 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-CO1P00395 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MT-CO1P00395 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 RN7SKP230-201ENST00000365642 335 ntBASIC15.26■□□□□ 0.03
MT-CO1P00395 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-CO1P00395 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-CO1P00395 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-CO1P00395 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MT-CO1P00395 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.26■□□□□ 0.03
MT-CO1P00395 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-CO1P00395 MIR4683-201ENST00000579659 81 ntBASIC15.26■□□□□ 0.03
MT-CO1P00395 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-CO1P00395 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-CO1P00395 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
MT-CO1P00395 INTS4P1-203ENST00000641008 3683 ntBASIC15.26■□□□□ 0.03
MT-CO1P00395 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MT-CO1P00395 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.26■□□□□ 0.03
MT-CO1P00395 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MT-CO1P00395 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MT-CO1P00395 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-CO1P00395 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 AP000593.2-201ENST00000542775 1433 ntBASIC15.26■□□□□ 0.03
MT-CO1P00395 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-CO1P00395 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MT-CO1P00395 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.25■□□□□ 0.03
MT-CO1P00395 FAM45BP-202ENST00000592932 1624 ntBASIC15.25■□□□□ 0.03
MT-CO1P00395 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MT-CO1P00395 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-CO1P00395 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-CO1P00395 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-CO1P00395 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MT-CO1P00395 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MT-CO1P00395 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-CO1P00395 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms