Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1AO95602 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
POLR1AO95602 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
POLR1AO95602 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 AC025183.3-201ENST00000623526 1482 ntBASIC20.99■□□□□ 0.95
POLR1AO95602 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR1AO95602 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
POLR1AO95602 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1AO95602 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
POLR1AO95602 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR1AO95602 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
POLR1AO95602 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
POLR1AO95602 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR1AO95602 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC20.98■□□□□ 0.95
POLR1AO95602 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC20.98■□□□□ 0.95
POLR1AO95602 TRMT112P3-201ENST00000580149 358 ntBASIC20.98■□□□□ 0.95
POLR1AO95602 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 AL118522.1-201ENST00000611368 560 ntBASIC20.98■□□□□ 0.95
POLR1AO95602 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR1AO95602 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR1AO95602 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR1AO95602 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR1AO95602 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR1AO95602 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 TPO-203ENST00000346956 2923 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR1AO95602 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR1AO95602 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR1AO95602 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR1AO95602 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1AO95602 RN7SL494P-201ENST00000461517 304 ntBASIC20.98■□□□□ 0.95
POLR1AO95602 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC20.98■□□□□ 0.95
POLR1AO95602 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
POLR1AO95602 AC068867.1-201ENST00000559855 150 ntBASIC20.98■□□□□ 0.95
POLR1AO95602 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC20.98■□□□□ 0.95
POLR1AO95602 AC010632.2-201ENST00000588369 1224 ntBASIC20.98■□□□□ 0.95
POLR1AO95602 AC027601.3-201ENST00000622907 509 ntBASIC20.98■□□□□ 0.95
POLR1AO95602 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
POLR1AO95602 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
POLR1AO95602 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
POLR1AO95602 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
POLR1AO95602 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 TMBIM7P-202ENST00000641474 1516 ntBASIC20.97■□□□□ 0.95
POLR1AO95602 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.97■□□□□ 0.95
POLR1AO95602 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
POLR1AO95602 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR1AO95602 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
POLR1AO95602 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 RPL3P5-201ENST00000441645 1232 ntBASIC20.97■□□□□ 0.95
POLR1AO95602 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 RHEB-207ENST00000496004 744 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR1AO95602 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC20.97■□□□□ 0.95
POLR1AO95602 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.97■□□□□ 0.95
POLR1AO95602 AC006483.2-201ENST00000609813 515 ntBASIC20.97■□□□□ 0.95
POLR1AO95602 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
POLR1AO95602 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
POLR1AO95602 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1AO95602 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 AP001267.2-201ENST00000532619 2086 ntBASIC20.96■□□□□ 0.95
POLR1AO95602 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR1AO95602 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR1AO95602 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC20.96■□□□□ 0.95
POLR1AO95602 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR1AO95602 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 RN7SL357P-201ENST00000581065 298 ntBASIC20.96■□□□□ 0.95
POLR1AO95602 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR1AO95602 AC006548.2-201ENST00000605217 529 ntBASIC20.96■□□□□ 0.95
POLR1AO95602 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR1AO95602 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
POLR1AO95602 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1AO95602 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR1AO95602 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms