Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 ACKR1-201ENST00000368121 1240 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 SOCS2P1-201ENST00000417727 557 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 AC007969.1-201ENST00000433675 447 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 MYCLP2-201ENST00000449268 967 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.11□□□□□ -0.15
SCN2BO60939 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.11□□□□□ -0.15
SCN2BO60939 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.11□□□□□ -0.15
SCN2BO60939 CLUHP6-201ENST00000580789 941 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.11□□□□□ -0.15
SCN2BO60939 AC009118.2-201ENST00000613275 655 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 INE2-201ENST00000630399 1874 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.11□□□□□ -0.15
SCN2BO60939 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SCN2BO60939 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.11□□□□□ -0.15
SCN2BO60939 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN2BO60939 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 AC104581.4-201ENST00000623126 3052 ntBASIC14.11□□□□□ -0.15
SCN2BO60939 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN2BO60939 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN2BO60939 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.1□□□□□ -0.15
SCN2BO60939 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN2BO60939 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.1□□□□□ -0.15
SCN2BO60939 MST1P2-201ENST00000457982 2291 ntBASIC14.1□□□□□ -0.15
SCN2BO60939 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.1□□□□□ -0.15
SCN2BO60939 RN7SKP230-201ENST00000365642 335 ntBASIC14.1□□□□□ -0.15
SCN2BO60939 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
SCN2BO60939 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.1□□□□□ -0.15
SCN2BO60939 SERBP1P5-201ENST00000510079 1181 ntBASIC14.1□□□□□ -0.15
SCN2BO60939 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.1□□□□□ -0.15
SCN2BO60939 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.1□□□□□ -0.15
SCN2BO60939 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN2BO60939 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
SCN2BO60939 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SCN2BO60939 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.1□□□□□ -0.15
SCN2BO60939 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCN2BO60939 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SCN2BO60939 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SCN2BO60939 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.09□□□□□ -0.15
SCN2BO60939 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.09□□□□□ -0.15
SCN2BO60939 RNA5SP421-201ENST00000516864 134 ntBASIC14.09□□□□□ -0.15
SCN2BO60939 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.09□□□□□ -0.15
SCN2BO60939 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.09□□□□□ -0.15
SCN2BO60939 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.09□□□□□ -0.15
SCN2BO60939 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SCN2BO60939 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 AC020910.6-201ENST00000623084 1459 ntBASIC14.09□□□□□ -0.15
SCN2BO60939 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SCN2BO60939 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.09□□□□□ -0.15
SCN2BO60939 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms