Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 DUX4L27-201ENST00000554796 1261 ntBASIC14.25□□□□□ -0.13
PDLIM1O00151 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.25□□□□□ -0.13
PDLIM1O00151 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.25□□□□□ -0.13
PDLIM1O00151 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.25□□□□□ -0.13
PDLIM1O00151 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.25□□□□□ -0.13
PDLIM1O00151 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 AC093512.1-201ENST00000617969 520 ntBASIC14.25□□□□□ -0.13
PDLIM1O00151 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 AC099521.2-201ENST00000619354 2036 ntBASIC14.25□□□□□ -0.13
PDLIM1O00151 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 AC068760.1-201ENST00000493579 1953 ntBASIC14.25□□□□□ -0.13
PDLIM1O00151 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDLIM1O00151 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PDLIM1O00151 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PDLIM1O00151 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PDLIM1O00151 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
PDLIM1O00151 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PDLIM1O00151 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 AC016397.2-201ENST00000624848 1985 ntBASIC14.24□□□□□ -0.13
PDLIM1O00151 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.24□□□□□ -0.13
PDLIM1O00151 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.24□□□□□ -0.13
PDLIM1O00151 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.24□□□□□ -0.13
PDLIM1O00151 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.24□□□□□ -0.13
PDLIM1O00151 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 AL390955.2-201ENST00000603032 514 ntBASIC14.24□□□□□ -0.13
PDLIM1O00151 AL158211.3-201ENST00000607385 239 ntBASIC14.24□□□□□ -0.13
PDLIM1O00151 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM1O00151 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM1O00151 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM1O00151 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM1O00151 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
PDLIM1O00151 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDLIM1O00151 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM1O00151 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PDLIM1O00151 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDLIM1O00151 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.23□□□□□ -0.13
PDLIM1O00151 AC073548.1-201ENST00000624088 1882 ntBASIC14.23□□□□□ -0.13
PDLIM1O00151 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM1O00151 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.23□□□□□ -0.13
PDLIM1O00151 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM1O00151 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDLIM1O00151 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PDLIM1O00151 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM1O00151 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM1O00151 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PDLIM1O00151 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.23□□□□□ -0.13
PDLIM1O00151 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM1O00151 AL355385.1-201ENST00000606123 409 ntBASIC14.23□□□□□ -0.13
PDLIM1O00151 RN7SL828P-201ENST00000607615 303 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms