Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
COLCA2A8K830 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC11.32□□□□□ -0.6
COLCA2A8K830 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 EEF1DP4-201ENST00000446006 880 ntBASIC11.32□□□□□ -0.6
COLCA2A8K830 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 RNA5SP413-201ENST00000516373 109 ntBASIC11.32□□□□□ -0.6
COLCA2A8K830 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
COLCA2A8K830 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.32□□□□□ -0.6
COLCA2A8K830 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.32□□□□□ -0.6
COLCA2A8K830 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC11.32□□□□□ -0.6
COLCA2A8K830 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 PER1-211ENST00000581082 4521 ntTSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC11.32□□□□□ -0.6
COLCA2A8K830 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC11.32□□□□□ -0.6
COLCA2A8K830 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.32□□□□□ -0.6
COLCA2A8K830 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
COLCA2A8K830 TUBB8P4-201ENST00000511806 1324 ntBASIC11.32□□□□□ -0.6
COLCA2A8K830 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
COLCA2A8K830 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.32□□□□□ -0.6
COLCA2A8K830 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
COLCA2A8K830 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.31□□□□□ -0.6
COLCA2A8K830 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
COLCA2A8K830 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC11.31□□□□□ -0.6
COLCA2A8K830 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC11.31□□□□□ -0.6
COLCA2A8K830 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC11.31□□□□□ -0.6
COLCA2A8K830 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.31□□□□□ -0.6
COLCA2A8K830 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.31□□□□□ -0.6
COLCA2A8K830 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
COLCA2A8K830 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 AC007614.4-201ENST00000564048 1827 ntBASIC11.31□□□□□ -0.6
COLCA2A8K830 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
COLCA2A8K830 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
COLCA2A8K830 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.31□□□□□ -0.6
COLCA2A8K830 RPS8P6-201ENST00000426177 609 ntBASIC11.31□□□□□ -0.6
COLCA2A8K830 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
COLCA2A8K830 AC091607.1-201ENST00000490318 1060 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms