Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCCD1A6NED2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.8■□□□□ 0.12
RCCD1A6NED2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 KRT8P35-201ENST00000483942 1338 ntBASIC15.79■□□□□ 0.12
RCCD1A6NED2 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 GIMAP3P-201ENST00000495150 836 ntBASIC15.79■□□□□ 0.12
RCCD1A6NED2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCCD1A6NED2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RCCD1A6NED2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 C1QBPP1-201ENST00000400117 770 ntBASIC15.78■□□□□ 0.12
RCCD1A6NED2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 AC134915.1-201ENST00000426461 574 ntBASIC15.78■□□□□ 0.12
RCCD1A6NED2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RCCD1A6NED2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 AC114812.1-204ENST00000449669 728 ntBASIC15.78■□□□□ 0.12
RCCD1A6NED2 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.78■□□□□ 0.12
RCCD1A6NED2 AC103988.2-201ENST00000561804 725 ntBASIC15.78■□□□□ 0.12
RCCD1A6NED2 AL359711.2-201ENST00000563105 872 ntBASIC15.78■□□□□ 0.12
RCCD1A6NED2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms