Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 WFDC1-204ENST00000613603 549 ntBASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 AP005019.2-201ENST00000615104 511 ntBASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 AL603764.1-201ENST00000636452 321 ntBASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 CR383656.2-201ENST00000548656 2254 ntBASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DRB4X5D2U9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 CICP20-201ENST00000443330 2801 ntBASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
HLA-DRB4X5D2U9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 RNU1-114P-201ENST00000365297 166 ntBASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 ACKR1-201ENST00000368121 1240 ntBASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AP006294.1-201ENST00000415407 339 ntBASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 KRT18P25-201ENST00000508931 1278 ntBASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AC009486.1-201ENST00000569860 813 ntBASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AC005252.2-201ENST00000624630 1141 ntBASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AL033527.5-201ENST00000641382 801 ntBASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HLA-DRB4X5D2U9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.26□□□□□ -0.61
HLA-DRB4X5D2U9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms