Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 MIR1202-201ENST00000408529 83 ntBASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 AC244452.3-201ENST00000636814 210 ntBASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 AC113367.3-201ENST00000508316 1912 ntBASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 AL138709.1-201ENST00000614840 1693 ntBASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 MTX1P1-201ENST00000440904 838 ntBASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 AKR7A2P1-201ENST00000460134 915 ntBASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 RN7SL190P-201ENST00000582519 257 ntBASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 AC106872.11-201ENST00000605838 421 ntBASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHB1Q9Y5F3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB1Q9Y5F3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB1Q9Y5F3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHB1Q9Y5F3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms