Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AL512430.1-201ENST00000392575 860 ntBASIC17.03■□□□□ 0.32
PNMA3Q9UL41 XBP1P1-201ENST00000436573 652 ntBASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 CHCHD2P9-201ENST00000461726 456 ntBASIC17.03■□□□□ 0.32
PNMA3Q9UL41 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AC023090.2-201ENST00000625182 2110 ntBASIC17.03■□□□□ 0.32
PNMA3Q9UL41 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PNMA3Q9UL41 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 TSPY25P-201ENST00000429463 745 ntBASIC17.02■□□□□ 0.32
PNMA3Q9UL41 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 AC007881.3-201ENST00000608897 607 ntBASIC17.02■□□□□ 0.32
PNMA3Q9UL41 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PNMA3Q9UL41 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 AC015909.3-201ENST00000572855 1794 ntBASIC17.02■□□□□ 0.31
PNMA3Q9UL41 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
PNMA3Q9UL41 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PNMA3Q9UL41 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PNMA3Q9UL41 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PNMA3Q9UL41 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.01■□□□□ 0.31
PNMA3Q9UL41 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PNMA3Q9UL41 AHCYP4-201ENST00000419201 1315 ntBASIC17.01■□□□□ 0.31
PNMA3Q9UL41 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PNMA3Q9UL41 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PNMA3Q9UL41 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PNMA3Q9UL41 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms