Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 SCARNA21-201ENST00000517026 139 ntBASIC14.88□□□□□ -0.03
MBD1Q9UIS9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 MIR4754-201ENST00000582477 89 ntBASIC14.88□□□□□ -0.03
MBD1Q9UIS9 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 AL138725.1-201ENST00000407347 1314 ntBASIC14.88□□□□□ -0.03
MBD1Q9UIS9 AL008718.2-201ENST00000609206 1313 ntBASIC14.88□□□□□ -0.03
MBD1Q9UIS9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MBD1Q9UIS9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.87□□□□□ -0.03
MBD1Q9UIS9 AC103691.2-201ENST00000618824 433 ntBASIC14.87□□□□□ -0.03
MBD1Q9UIS9 Z98259.2-201ENST00000641583 609 ntBASIC14.87□□□□□ -0.03
MBD1Q9UIS9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD1Q9UIS9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.86□□□□□ -0.03
MBD1Q9UIS9 AC026316.1-201ENST00000398900 414 ntBASIC14.86□□□□□ -0.03
MBD1Q9UIS9 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms