Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL20A1Q9P218 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL20A1Q9P218 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.61■□□□□ 0.25
COL20A1Q9P218 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.61■□□□□ 0.25
COL20A1Q9P218 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
COL20A1Q9P218 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
COL20A1Q9P218 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 OR2K2-202ENST00000374428 1038 ntBASIC16.61■□□□□ 0.25
COL20A1Q9P218 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.61■□□□□ 0.25
COL20A1Q9P218 ST13P19-201ENST00000442505 1124 ntBASIC16.61■□□□□ 0.25
COL20A1Q9P218 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.61■□□□□ 0.25
COL20A1Q9P218 AC012044.1-201ENST00000603431 297 ntBASIC16.61■□□□□ 0.25
COL20A1Q9P218 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.61■□□□□ 0.25
COL20A1Q9P218 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.61■□□□□ 0.25
COL20A1Q9P218 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.61■□□□□ 0.25
COL20A1Q9P218 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL20A1Q9P218 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 AC015909.3-201ENST00000572855 1794 ntBASIC16.6■□□□□ 0.25
COL20A1Q9P218 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 PGAM1P5-201ENST00000548011 764 ntBASIC16.6■□□□□ 0.25
COL20A1Q9P218 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 AL109837.1-201ENST00000603272 613 ntBASIC16.6■□□□□ 0.25
COL20A1Q9P218 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COL20A1Q9P218 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL20A1Q9P218 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL20A1Q9P218 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COL20A1Q9P218 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
COL20A1Q9P218 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL20A1Q9P218 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL20A1Q9P218 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL20A1Q9P218 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COL20A1Q9P218 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms