Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ACE3P-201ENST00000423435 1973 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 AC026748.1-201ENST00000624349 3251 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ARSEP1-201ENST00000420443 635 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 CNN2P8-201ENST00000421872 913 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 RPL7P3-201ENST00000441388 714 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 AC104989.1-201ENST00000519711 778 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 AP000812.2-201ENST00000538934 718 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 GNRHR2-203ENST00000581100 1187 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 RHOXF1P1-202ENST00000635473 501 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 AC091951.1-201ENST00000512854 2465 ntBASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 OR8S1-201ENST00000310194 1080 ntBASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 TLE1P1-201ENST00000422965 589 ntBASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 FO681548.1-201ENST00000455617 1132 ntBASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 ACA64.2-201ENST00000459014 129 ntBASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 FTLP10-202ENST00000505798 471 ntBASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 AC026434.2-201ENST00000506094 1078 ntBASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 AP005482.1-201ENST00000563722 1273 ntBASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 PTENP1-202ENST00000532280 3996 ntBASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PARPBPQ9NWS1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms