Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL662799.1-202ENST00000614205 422 ntBASIC14.74□□□□□ -0.05
SSU72Q9NP77 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.74□□□□□ -0.05
SSU72Q9NP77 AP001002.3-201ENST00000623482 206 ntBASIC14.74□□□□□ -0.05
SSU72Q9NP77 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSU72Q9NP77 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.74□□□□□ -0.05
SSU72Q9NP77 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 GIMAP3P-201ENST00000495150 836 ntBASIC14.73□□□□□ -0.05
SSU72Q9NP77 POLD2P1-201ENST00000511220 997 ntBASIC14.73□□□□□ -0.05
SSU72Q9NP77 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 AC036164.1-201ENST00000570544 333 ntBASIC14.73□□□□□ -0.05
SSU72Q9NP77 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 BTBD7P1-201ENST00000447253 1453 ntBASIC14.73□□□□□ -0.05
SSU72Q9NP77 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 AC139712.1-201ENST00000378256 1875 ntBASIC14.73□□□□□ -0.05
SSU72Q9NP77 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SSU72Q9NP77 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSU72Q9NP77 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 KRT18P13-201ENST00000400056 1290 ntBASIC14.72□□□□□ -0.05
SSU72Q9NP77 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms