Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC4CQ9HCJ2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 AC020658.7-201ENST00000624274 2442 ntBASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 COX5BP8-201ENST00000416911 349 ntBASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 ZNF890P-202ENST00000530367 1156 ntBASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 TIMM17BP1-201ENST00000545713 516 ntBASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 AL844908.2-201ENST00000609461 460 ntBASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRRC4CQ9HCJ2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 AL391069.4-201ENST00000609583 481 ntBASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.3■□□□□ 0.04
LRRC4CQ9HCJ2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms