Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 AL512638.1-201ENST00000457493 794 ntBASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 AC104794.3-201ENST00000566840 1248 ntBASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 AL390955.2-201ENST00000603032 514 ntBASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 MBLAC2-202ENST00000514906 1936 ntBASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 KRT18P28-201ENST00000453838 1332 ntBASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 INTS4P2-202ENST00000614726 2019 ntBASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J3Q9H1A7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AGGF1P1-201ENST00000509500 2073 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC134915.1-201ENST00000426461 574 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AL442647.2-201ENST00000429864 857 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 METTL21AP1-201ENST00000438852 635 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC093004.1-201ENST00000508850 424 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC120045.2-201ENST00000567334 178 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 AC023511.2-201ENST00000618803 211 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
POLR2J3Q9H1A7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms