Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 AC008738.7-201ENST00000609744 511 ntBASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 AL356585.2-201ENST00000625078 2396 ntBASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 AL138725.1-201ENST00000407347 1314 ntBASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.13■□□□□ 0.01
PHACTR1Q9C0D0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 RNU1-114P-201ENST00000365297 166 ntBASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 EIF3FP3-201ENST00000434851 1086 ntBASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 AC132872.1-201ENST00000566986 1195 ntBASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 AC012617.1-204ENST00000586340 2305 ntBASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PHACTR1Q9C0D0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 Z82170.1-201ENST00000625081 3192 ntBASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 AC004945.1-201ENST00000416738 983 ntBASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 AL442647.2-201ENST00000429864 857 ntBASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 GCOM2-201ENST00000509133 1104 ntBASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 AC099568.2-201ENST00000609194 695 ntBASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 AP001002.3-201ENST00000623482 206 ntBASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHACTR1Q9C0D0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms