Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 VDAC1P7-201ENST00000462417 847 ntBASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 KRT18P43-201ENST00000469825 1281 ntBASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 TMEM198B-204ENST00000484016 896 ntBASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 AC068587.3-201ENST00000526613 355 ntBASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 AC000095.1-201ENST00000603208 874 ntBASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 AL607033.1-201ENST00000623900 1599 ntBASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF4Q9BUZ4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 KLF2P4-201ENST00000451959 1225 ntBASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 AL033527.4-201ENST00000641026 673 ntBASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 PDIA3P1-201ENST00000471856 1510 ntBASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF4Q9BUZ4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms