Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.91□□□□□ -0.18
TM9SF2Q99805 BTNL10-201ENST00000595971 695 ntBASIC13.91□□□□□ -0.18
TM9SF2Q99805 AC093813.1-201ENST00000605066 256 ntBASIC13.91□□□□□ -0.18
TM9SF2Q99805 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.91□□□□□ -0.18
TM9SF2Q99805 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TM9SF2Q99805 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
TM9SF2Q99805 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.91□□□□□ -0.18
TM9SF2Q99805 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.91□□□□□ -0.18
TM9SF2Q99805 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
TM9SF2Q99805 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.91□□□□□ -0.18
TM9SF2Q99805 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TM9SF2Q99805 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.91□□□□□ -0.18
TM9SF2Q99805 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF2Q99805 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 CICP11-201ENST00000434745 2827 ntBASIC13.9□□□□□ -0.18
TM9SF2Q99805 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.9□□□□□ -0.18
TM9SF2Q99805 AC112492.5-201ENST00000421897 457 ntBASIC13.9□□□□□ -0.18
TM9SF2Q99805 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 AC015910.1-201ENST00000579400 975 ntBASIC13.9□□□□□ -0.18
TM9SF2Q99805 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 AC233724.13-201ENST00000598383 410 ntBASIC13.9□□□□□ -0.18
TM9SF2Q99805 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TM9SF2Q99805 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TM9SF2Q99805 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TM9SF2Q99805 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.9□□□□□ -0.19
TM9SF2Q99805 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TM9SF2Q99805 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.9□□□□□ -0.19
TM9SF2Q99805 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TM9SF2Q99805 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TM9SF2Q99805 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
TM9SF2Q99805 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TM9SF2Q99805 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TM9SF2Q99805 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF2Q99805 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF2Q99805 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TM9SF2Q99805 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF2Q99805 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF2Q99805 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF2Q99805 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TM9SF2Q99805 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF2Q99805 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TM9SF2Q99805 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF2Q99805 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms