Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
NDNQ99608 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
NDNQ99608 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.99□□□□□ -0.01
NDNQ99608 NUS1P3-201ENST00000423502 862 ntBASIC14.99□□□□□ -0.01
NDNQ99608 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.99□□□□□ -0.01
NDNQ99608 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.99□□□□□ -0.01
NDNQ99608 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 LINC02560-201ENST00000596379 459 ntBASIC14.99□□□□□ -0.01
NDNQ99608 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.99□□□□□ -0.01
NDNQ99608 AC136759.1-202ENST00000530858 2194 ntBASIC14.99□□□□□ -0.01
NDNQ99608 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NDNQ99608 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NDNQ99608 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NDNQ99608 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NDNQ99608 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
NDNQ99608 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.98□□□□□ -0.01
NDNQ99608 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.98□□□□□ -0.01
NDNQ99608 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.98□□□□□ -0.01
NDNQ99608 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.98□□□□□ -0.01
NDNQ99608 AC055811.4-201ENST00000624039 1754 ntBASIC14.98□□□□□ -0.01
NDNQ99608 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.98□□□□□ -0.01
NDNQ99608 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.98□□□□□ -0.01
NDNQ99608 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NDNQ99608 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.98□□□□□ -0.01
NDNQ99608 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.98□□□□□ -0.01
NDNQ99608 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.98□□□□□ -0.01
NDNQ99608 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.98□□□□□ -0.01
NDNQ99608 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NDNQ99608 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.98□□□□□ -0.01
NDNQ99608 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.98□□□□□ -0.01
NDNQ99608 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 AC236430.1-201ENST00000402231 743 ntBASIC14.98□□□□□ -0.01
NDNQ99608 KLF2P2-201ENST00000416807 1039 ntBASIC14.98□□□□□ -0.01
NDNQ99608 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.98□□□□□ -0.01
NDNQ99608 BCRP1-201ENST00000444246 691 ntBASIC14.98□□□□□ -0.01
NDNQ99608 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.98□□□□□ -0.01
NDNQ99608 AC026434.2-201ENST00000506094 1078 ntBASIC14.98□□□□□ -0.01
NDNQ99608 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.98□□□□□ -0.01
NDNQ99608 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.98□□□□□ -0.01
NDNQ99608 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NDNQ99608 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
NDNQ99608 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.98□□□□□ -0.01
NDNQ99608 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
NDNQ99608 AC008494.3-201ENST00000606615 944 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms