Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC215219.1-201ENST00000400706 1817 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 KRT8P35-201ENST00000483942 1338 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 MRPL37P1-201ENST00000592451 1337 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV9Q99603 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
TRGV9Q99603 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 RNU1-114P-201ENST00000365297 166 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 AC055876.3-201ENST00000431496 288 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.62□□□□□ -0.55
TRGV9Q99603 TMEM198B-204ENST00000484016 896 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.62□□□□□ -0.55
TRGV9Q99603 AP001582.1-201ENST00000525856 295 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.62□□□□□ -0.55
TRGV9Q99603 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 DUX4L27-201ENST00000554796 1261 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.62□□□□□ -0.55
TRGV9Q99603 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.62□□□□□ -0.55
TRGV9Q99603 AC138649.4-201ENST00000612222 287 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 AL691403.2-201ENST00000618460 490 ntBASIC11.62□□□□□ -0.55
TRGV9Q99603 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TRGV9Q99603 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
TRGV9Q99603 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TRGV9Q99603 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRGV9Q99603 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.62□□□□□ -0.55
TRGV9Q99603 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TRGV9Q99603 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.61□□□□□ -0.55
TRGV9Q99603 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TRGV9Q99603 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
TRGV9Q99603 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
TRGV9Q99603 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TRGV9Q99603 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.61□□□□□ -0.55
TRGV9Q99603 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
TRGV9Q99603 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TRGV9Q99603 KLF2P2-201ENST00000416807 1039 ntBASIC11.61□□□□□ -0.55
TRGV9Q99603 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.61□□□□□ -0.55
TRGV9Q99603 AL442647.2-201ENST00000429864 857 ntBASIC11.61□□□□□ -0.55
TRGV9Q99603 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TRGV9Q99603 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.61□□□□□ -0.55
TRGV9Q99603 AL512638.1-201ENST00000457493 794 ntBASIC11.61□□□□□ -0.55
TRGV9Q99603 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.61□□□□□ -0.55
TRGV9Q99603 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRGV9Q99603 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms