Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 AC132938.4-201ENST00000623835 848 ntBASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP3Q96JB5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 AC003102.2-201ENST00000589195 1469 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 AL136379.1-201ENST00000623471 2642 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 AC092933.1-201ENST00000393644 945 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 POM121L8P-201ENST00000417732 1281 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 AC016694.1-201ENST00000434179 700 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 POM121L9P-203ENST00000441984 1285 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 FTH1P14-201ENST00000482930 551 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 CR383656.12-201ENST00000549567 513 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 GNRHR2-203ENST00000581100 1187 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 FAM45BP-202ENST00000592932 1624 ntBASIC16.81■□□□□ 0.28
CDK5RAP3Q96JB5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 AC113367.3-201ENST00000508316 1912 ntBASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 CLUHP2-201ENST00000426660 1303 ntBASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP3Q96JB5 FTLP10-202ENST00000505798 471 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms