Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HPS1Q92902 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.79□□□□□ -0.2
HPS1Q92902 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 FAM220BP-201ENST00000377689 816 ntBASIC13.79□□□□□ -0.2
HPS1Q92902 AL355994.1-201ENST00000424379 260 ntBASIC13.79□□□□□ -0.2
HPS1Q92902 AC142381.1-201ENST00000426099 345 ntBASIC13.79□□□□□ -0.2
HPS1Q92902 AC241585.1-201ENST00000433527 519 ntBASIC13.79□□□□□ -0.2
HPS1Q92902 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.79□□□□□ -0.2
HPS1Q92902 AC097493.3-201ENST00000509725 367 ntBASIC13.79□□□□□ -0.2
HPS1Q92902 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC13.79□□□□□ -0.2
HPS1Q92902 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.79□□□□□ -0.2
HPS1Q92902 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.79□□□□□ -0.2
HPS1Q92902 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
HPS1Q92902 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.79□□□□□ -0.2
HPS1Q92902 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 AC023024.2-201ENST00000623561 1993 ntBASIC13.79□□□□□ -0.2
HPS1Q92902 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HPS1Q92902 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 AL589702.1-201ENST00000641229 1509 ntBASIC13.79□□□□□ -0.2
HPS1Q92902 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HPS1Q92902 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HPS1Q92902 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.79□□□□□ -0.2
HPS1Q92902 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.79□□□□□ -0.2
HPS1Q92902 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.79□□□□□ -0.2
HPS1Q92902 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.78□□□□□ -0.2
HPS1Q92902 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
HPS1Q92902 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.78□□□□□ -0.2
HPS1Q92902 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HPS1Q92902 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.78□□□□□ -0.2
HPS1Q92902 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.78□□□□□ -0.2
HPS1Q92902 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.78□□□□□ -0.2
HPS1Q92902 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.78□□□□□ -0.2
HPS1Q92902 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.78□□□□□ -0.2
HPS1Q92902 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HPS1Q92902 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.78□□□□□ -0.2
HPS1Q92902 RNA5SP410-201ENST00000516285 106 ntBASIC13.78□□□□□ -0.2
HPS1Q92902 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.78□□□□□ -0.2
HPS1Q92902 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.78□□□□□ -0.2
HPS1Q92902 RARRES2P9-201ENST00000565168 469 ntBASIC13.78□□□□□ -0.2
HPS1Q92902 RN7SL204P-201ENST00000582831 262 ntBASIC13.78□□□□□ -0.2
HPS1Q92902 MIR4453-201ENST00000584019 89 ntBASIC13.78□□□□□ -0.2
HPS1Q92902 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.78□□□□□ -0.2
HPS1Q92902 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.78□□□□□ -0.2
HPS1Q92902 AC007967.4-201ENST00000614700 386 ntBASIC13.78□□□□□ -0.2
HPS1Q92902 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.78□□□□□ -0.2
HPS1Q92902 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HPS1Q92902 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HPS1Q92902 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HPS1Q92902 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.78□□□□□ -0.2
HPS1Q92902 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.78□□□□□ -0.2
HPS1Q92902 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.78□□□□□ -0.2
HPS1Q92902 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HPS1Q92902 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HPS1Q92902 AC131902.2-201ENST00000566892 2172 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 637.2 ms