Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
AP3S1Q92572 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
AP3S1Q92572 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.14□□□□□ -0.31
AP3S1Q92572 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.14□□□□□ -0.31
AP3S1Q92572 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.14□□□□□ -0.31
AP3S1Q92572 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.14□□□□□ -0.31
AP3S1Q92572 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 MIR6074-201ENST00000612054 107 ntBASIC13.14□□□□□ -0.31
AP3S1Q92572 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
AP3S1Q92572 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S1Q92572 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
AP3S1Q92572 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S1Q92572 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.13□□□□□ -0.31
AP3S1Q92572 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 AC009947.1-201ENST00000444350 727 ntBASIC13.13□□□□□ -0.31
AP3S1Q92572 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
AP3S1Q92572 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
AP3S1Q92572 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 KRT19P2-202ENST00000557173 1012 ntBASIC13.13□□□□□ -0.31
AP3S1Q92572 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 AC093458.2-201ENST00000623150 629 ntBASIC13.13□□□□□ -0.31
AP3S1Q92572 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
AP3S1Q92572 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
AP3S1Q92572 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 275.1 ms