Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.79■□□□□ 0.12
DDX1Q92499 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
DDX1Q92499 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
DDX1Q92499 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
DDX1Q92499 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
DDX1Q92499 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.78■□□□□ 0.12
DDX1Q92499 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
DDX1Q92499 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.78■□□□□ 0.12
DDX1Q92499 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.78■□□□□ 0.12
DDX1Q92499 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 AL022328.3-201ENST00000607943 679 ntBASIC15.78■□□□□ 0.12
DDX1Q92499 AC091271.1-201ENST00000611877 1162 ntBASIC15.78■□□□□ 0.12
DDX1Q92499 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.78■□□□□ 0.12
DDX1Q92499 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
DDX1Q92499 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
DDX1Q92499 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 AC015688.4-201ENST00000580780 1647 ntBASIC15.78■□□□□ 0.12
DDX1Q92499 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.78■□□□□ 0.12
DDX1Q92499 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DDX1Q92499 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.78■□□□□ 0.12
DDX1Q92499 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.77■□□□□ 0.12
DDX1Q92499 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 KHSRPP1-201ENST00000427983 1768 ntBASIC15.77■□□□□ 0.12
DDX1Q92499 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.77■□□□□ 0.12
DDX1Q92499 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
DDX1Q92499 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.77■□□□□ 0.12
DDX1Q92499 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
DDX1Q92499 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
DDX1Q92499 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 CD8B2-202ENST00000417670 633 ntBASIC15.77■□□□□ 0.12
DDX1Q92499 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
DDX1Q92499 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.77■□□□□ 0.12
DDX1Q92499 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.77■□□□□ 0.12
DDX1Q92499 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.77■□□□□ 0.12
DDX1Q92499 AC078819.1-201ENST00000547454 765 ntBASIC15.77■□□□□ 0.12
DDX1Q92499 AC012085.1-201ENST00000548270 765 ntBASIC15.77■□□□□ 0.12
DDX1Q92499 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.77■□□□□ 0.12
DDX1Q92499 AC079328.1-201ENST00000560358 952 ntBASIC15.77■□□□□ 0.12
DDX1Q92499 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
DDX1Q92499 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
DDX1Q92499 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.77■□□□□ 0.11
DDX1Q92499 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
DDX1Q92499 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
DDX1Q92499 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DDX1Q92499 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DDX1Q92499 AL928921.2-201ENST00000641325 2442 ntBASIC15.77■□□□□ 0.11
DDX1Q92499 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
DDX1Q92499 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DDX1Q92499 RN7SL832P-201ENST00000607781 1756 ntBASIC15.77■□□□□ 0.11
DDX1Q92499 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
DDX1Q92499 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms