Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKAP2Q8WWK9 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKAP2Q8WWK9 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.8□□□□□ -0.04
CKAP2Q8WWK9 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 AL080243.2-201ENST00000418783 582 ntBASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 MED15P5-201ENST00000423150 992 ntBASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 POLD2P1-201ENST00000511220 997 ntBASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 AL365181.3-201ENST00000605886 3222 ntBASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKAP2Q8WWK9 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 FAM58DP-201ENST00000428076 619 ntBASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 ACTG1P14-201ENST00000446382 1122 ntBASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CKAP2Q8WWK9 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 AP002761.4-201ENST00000565433 3361 ntBASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms