Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGB4Q8WW32 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 REXO1L2P-201ENST00000425429 2069 ntBASIC14.86□□□□□ -0.03
HMGB4Q8WW32 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 C18orf15-201ENST00000623680 2534 ntBASIC14.86□□□□□ -0.03
HMGB4Q8WW32 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 AC026316.1-201ENST00000398900 414 ntBASIC14.86□□□□□ -0.03
HMGB4Q8WW32 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 AC073352.2-201ENST00000609385 439 ntBASIC14.86□□□□□ -0.03
HMGB4Q8WW32 AL157813.1-201ENST00000612996 587 ntBASIC14.86□□□□□ -0.03
HMGB4Q8WW32 AP003419.4-201ENST00000616071 517 ntBASIC14.86□□□□□ -0.03
HMGB4Q8WW32 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB4Q8WW32 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 AL627231.1-201ENST00000394467 1125 ntBASIC14.85□□□□□ -0.03
HMGB4Q8WW32 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 RPL8P2-201ENST00000430538 502 ntBASIC14.85□□□□□ -0.03
HMGB4Q8WW32 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 AC006122.1-201ENST00000493323 440 ntBASIC14.85□□□□□ -0.03
HMGB4Q8WW32 AC008723.1-201ENST00000506922 207 ntBASIC14.85□□□□□ -0.03
HMGB4Q8WW32 ALG3P1-201ENST00000508806 1114 ntBASIC14.85□□□□□ -0.03
HMGB4Q8WW32 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 AL805961.1-201ENST00000642026 753 ntBASIC14.85□□□□□ -0.03
HMGB4Q8WW32 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms