Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SHROOM3Q8TF72 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHROOM3Q8TF72 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHROOM3Q8TF72 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SHROOM3Q8TF72 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHROOM3Q8TF72 CICP16-201ENST00000502609 2813 ntBASIC15.1■□□□□ 0.01
SHROOM3Q8TF72 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SHROOM3Q8TF72 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHROOM3Q8TF72 KRT8P4-201ENST00000509735 1454 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 RN7SL832P-201ENST00000607781 1756 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 COX5BP1-201ENST00000507622 393 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AP000812.2-201ENST00000538934 718 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 LINC01230-201ENST00000625222 3017 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AC139712.1-201ENST00000378256 1875 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 SLC25A24P2-201ENST00000415059 510 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AC253536.4-201ENST00000440539 267 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 BX088702.1-201ENST00000610784 235 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 Z98259.2-201ENST00000641583 609 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 AC215219.1-201ENST00000400706 1817 ntBASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHROOM3Q8TF72 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHROOM3Q8TF72 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHROOM3Q8TF72 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
SHROOM3Q8TF72 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHROOM3Q8TF72 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHROOM3Q8TF72 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0.01
SHROOM3Q8TF72 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHROOM3Q8TF72 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHROOM3Q8TF72 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHROOM3Q8TF72 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 AC006001.1-201ENST00000325130 474 ntBASIC15.08■□□□□ 0
SHROOM3Q8TF72 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SHROOM3Q8TF72 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SHROOM3Q8TF72 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHROOM3Q8TF72 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SHROOM3Q8TF72 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms