Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 AP000845.1-201ENST00000581677 2131 ntBASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
SHKBP1Q8TBC3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 Z97180.1-201ENST00000445173 988 ntBASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 RN7SL720P-201ENST00000488178 304 ntBASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 AC100757.4-201ENST00000626934 759 ntBASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 AC007292.2-201ENST00000593524 1812 ntBASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 C18orf15-201ENST00000623680 2534 ntBASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHKBP1Q8TBC3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 RPL18P13-201ENST00000478088 569 ntBASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 MARK2P5-201ENST00000507649 634 ntBASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 RN7SL574P-201ENST00000581512 297 ntBASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 AC090164.2-201ENST00000611487 516 ntBASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 AL805961.1-203ENST00000641078 1258 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms