Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 NUS1P3-201ENST00000423502 862 ntBASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 INGX-202ENST00000489074 768 ntBASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AC093004.1-201ENST00000508850 424 ntBASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 RRP7BP-205ENST00000566851 833 ntBASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AC124283.3-201ENST00000570869 594 ntBASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AC008761.3-201ENST00000624803 892 ntBASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 PRSS30P-206ENST00000641773 873 ntBASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.34□□□□□ -0.11
CLHC1Q8NHS4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLHC1Q8NHS4 AC012617.1-204ENST00000586340 2305 ntBASIC14.33□□□□□ -0.11
CLHC1Q8NHS4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLHC1Q8NHS4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLHC1Q8NHS4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLHC1Q8NHS4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLHC1Q8NHS4 KRT8P22-201ENST00000562317 1415 ntBASIC14.33□□□□□ -0.11
CLHC1Q8NHS4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLHC1Q8NHS4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CLHC1Q8NHS4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 PMS2P2-201ENST00000425039 1128 ntBASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 SERBP1P5-201ENST00000510079 1181 ntBASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 AC123567.1-201ENST00000548294 1261 ntBASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 AGGF1P1-201ENST00000509500 2073 ntBASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLHC1Q8NHS4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLHC1Q8NHS4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms