Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 AC092384.3-202ENST00000564646 2873 ntBASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 AC105250.1-201ENST00000509378 2057 ntBASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 ISCA2P1-201ENST00000425548 448 ntBASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 PDIA3P2-201ENST00000428073 158 ntBASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 AC116345.2-201ENST00000512837 523 ntBASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF248Q8NDW4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 RPSAP31-201ENST00000416648 895 ntBASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AC242376.1-201ENST00000559033 726 ntBASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AC135983.4-201ENST00000564116 1262 ntBASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AL136301.1-201ENST00000615830 422 ntBASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AL162426.1-201ENST00000624141 743 ntBASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF248Q8NDW4 AL805961.1-201ENST00000642026 753 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms