Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC38A9Q8NBW4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.96□□□□□ -0.18
SLC38A9Q8NBW4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 AC126177.1-201ENST00000547829 2218 ntBASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 KRT8P19-201ENST00000551916 1455 ntBASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 AL645933.1-201ENST00000440087 609 ntBASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 NUP210P1-202ENST00000504322 710 ntBASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC38A9Q8NBW4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 AC091046.1-201ENST00000331871 207 ntBASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 FGFR3P5-201ENST00000564496 886 ntBASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms