Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCUBE3Q8IX30 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.66■□□□□ 0.1
SCUBE3Q8IX30 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCUBE3Q8IX30 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCUBE3Q8IX30 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.66■□□□□ 0.1
SCUBE3Q8IX30 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.66■□□□□ 0.1
SCUBE3Q8IX30 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCUBE3Q8IX30 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 AC113367.3-201ENST00000508316 1912 ntBASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 GCOM2-201ENST00000509133 1104 ntBASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 BX088702.1-201ENST00000610784 235 ntBASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 MIR6787-201ENST00000616675 61 ntBASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 AL354702.1-201ENST00000442006 1960 ntBASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCUBE3Q8IX30 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AL136172.1-201ENST00000598590 1394 ntBASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CNN2P10-201ENST00000443067 918 ntBASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AP006547.1-201ENST00000563435 692 ntBASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 PPY2P-201ENST00000582808 702 ntBASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AC126755.1-201ENST00000525846 6405 ntBASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 MRPL37P1-201ENST00000592451 1337 ntBASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 AC092135.3-201ENST00000624151 1846 ntBASIC15.64■□□□□ 0.09
SCUBE3Q8IX30 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SCUBE3Q8IX30 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SCUBE3Q8IX30 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SCUBE3Q8IX30 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms