Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 MESTP3-201ENST00000503460 968 ntBASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 MIR4783-201ENST00000580343 82 ntBASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC011840.2-201ENST00000563063 1520 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC026320.2-201ENST00000434379 478 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 RTN3P1-201ENST00000536295 711 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AL136295.7-201ENST00000619226 1200 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AL645728.2-202ENST00000641679 227 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC011270.2-201ENST00000624293 2550 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AL157791.1-201ENST00000553667 1699 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 REXO1L2P-201ENST00000425429 2069 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC112504.1-201ENST00000623415 1841 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AL031713.1-201ENST00000564813 661 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 OR10B1P-201ENST00000601666 907 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 MIR6842-201ENST00000612539 65 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC242376.2-201ENST00000619355 883 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 TBC1D3J-201ENST00000620719 1426 ntBASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RP1L1Q8IWN7 AC090616.6-203ENST00000579186 1945 ntBASIC13.49□□□□□ -0.25
RP1L1Q8IWN7 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RP1L1Q8IWN7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RP1L1Q8IWN7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RP1L1Q8IWN7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.49□□□□□ -0.25
RP1L1Q8IWN7 PCDHA5-203ENST00000614258 4248 ntBASIC13.49□□□□□ -0.25
RP1L1Q8IWN7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RP1L1Q8IWN7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms