Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 AC124068.2-201ENST00000569473 1109 ntBASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 MARK2P16-201ENST00000605714 1723 ntBASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NPAS4Q8IUM7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 FER1L4-210ENST00000615531 5998 ntBASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 CICP23-201ENST00000605013 2741 ntBASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 CTBP2P4-201ENST00000513884 920 ntBASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NPAS4Q8IUM7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 AC025271.4-201ENST00000621477 1726 ntBASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 Z69890.1-201ENST00000382990 339 ntBASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 ST13P19-201ENST00000442505 1124 ntBASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 ORAOV1P1-201ENST00000503108 395 ntBASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 IGHV3-37-201ENST00000518544 340 ntBASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 AC009084.3-201ENST00000623356 437 ntBASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS4Q8IUM7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms