Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 MST1P2-201ENST00000457982 2291 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AC152010.1-201ENST00000415779 2006 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AC073439.1-201ENST00000624121 1774 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AC004987.2-201ENST00000395959 1148 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 FAM58DP-201ENST00000428076 619 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 GPS2P2-201ENST00000430745 888 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AC069120.2-201ENST00000524091 540 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 ALG1L8P-201ENST00000533887 760 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AL138918.1-201ENST00000568306 659 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 MIR4745-201ENST00000577608 62 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AC099521.3-201ENST00000624251 2938 ntBASIC13.1□□□□□ -0.31
C11orf88Q6PI97 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
C11orf88Q6PI97 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 FAM207CP-201ENST00000443486 507 ntBASIC13.09□□□□□ -0.31
C11orf88Q6PI97 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 AL512638.1-201ENST00000457493 794 ntBASIC13.09□□□□□ -0.31
C11orf88Q6PI97 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.09□□□□□ -0.31
C11orf88Q6PI97 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms