Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PDXDC2P-206ENST00000534700 1315 ntBASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 AC091769.1-201ENST00000619576 568 ntBASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 AC021305.1-201ENST00000520656 1514 ntBASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 SAT1-201ENST00000379251 801 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 SAT1-202ENST00000379253 909 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 SAT1-203ENST00000379254 868 ntTSL 3 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 ALG1L7P-201ENST00000502317 768 ntBASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 ALG1L3P-201ENST00000503331 765 ntBASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 FOXN3-AS2-201ENST00000554071 1262 ntBASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42BPAQ5VT25 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 SLC25A15P3-201ENST00000505530 290 ntBASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 KRT18P37-201ENST00000520711 1282 ntBASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 AC145285.5-201ENST00000562217 361 ntBASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 AC027139.1-201ENST00000565286 951 ntBASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 RARS-210ENST00000626454 177 ntTSL 5 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC21.71■■□□□ 1.07
CDC42BPAQ5VT25 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDC42BPAQ5VT25 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDC42BPAQ5VT25 AC232323.1-201ENST00000540724 2099 ntBASIC21.7■■□□□ 1.07
CDC42BPAQ5VT25 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDC42BPAQ5VT25 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDC42BPAQ5VT25 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 F11R-204ENST00000537746 1245 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 MIR6746-201ENST00000620971 63 ntBASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms