Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 AC144522.1-201ENST00000625111 1658 ntBASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
RNFT1Q5M7Z0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
RNFT1Q5M7Z0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RNFT1Q5M7Z0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RNFT1Q5M7Z0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.33□□□□□ -0.27
RNFT1Q5M7Z0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 HINT2P1-201ENST00000419438 481 ntBASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AC007274.2-201ENST00000421675 662 ntBASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AC078875.1-201ENST00000431907 724 ntBASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AC073150.1-201ENST00000450406 1084 ntBASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AC006122.1-201ENST00000493323 440 ntBASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 NAP1L6-202ENST00000641404 1222 ntBASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.33□□□□□ -0.28
RNFT1Q5M7Z0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 AC006335.1-201ENST00000445200 547 ntBASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 AL035414.1-201ENST00000451327 857 ntBASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 AC090857.1-201ENST00000527400 390 ntBASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNFT1Q5M7Z0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms